Department of Bioinformatics and Medical Engineering

Status	Chair Professor
Name	蔡進發 \| Jeffrey J.P. Tsai
Email	president@asia.edu.tw
Job title	Chair Professor, President, IEEE Fellow
Education	Ph.D. in Electrical Engineering and Computer Science, Northwestern University, USA
Expertise	Computer Science
Research Areas	Artificial Intelligence, Biological Data, Software Engineering, Distributed System
Websites	Personal Webpage

Year	Paper Title
2022	Chien-Hung Huang、Efendi Zainuddin、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Ka-Lok Ng, Network Subgraph-based Approach for Analyzing and Comparing Molecular Networks, PeerJ Computer Science, vol.10 pp.13137-13167, 2022
2022	Han-Wei Zhang、Zhi-Ren Tsai、Ko-Ta Chen、Sheng-Lun Hsu、Yi-Jie Kuo、Ying-Chin Lin、Shu-Wei Huang、Yu-Pin Chen、Hsiao-Ching Peng、Jeffrey J. P. Tsai、Chung-Yi Hsu, Enhanced Risk of Osteoporotic Fracture in Patients with Sarcopenia: A National Population-Based Study in Taiwan, Journal of Personalized Medicine, vol.12 no.5 pp.791-801, 2022
2022	Zon-Yin Shae、Jeffrey J. P. Tsai, A Clinical Kidney Intelligence Platform Based on Big Data ,Artificial Intelligence ,and Blockchain Technology, International Journal on Artificial Intelligence Tools, vol.31 no.3 pp.2241007-2241012, 2022
2021	Eskezeia Yihunie Dessie、Siang-Jyun Tu、Hui-Shan Chiang、Jeffrey J. P. Tsai、Ya-Sian Chang、Jan-Gowth Chang、Ka-Lok Ng, Construction and Validation of a Prognostic Gene-Based Model for Overall Survival Prediction in Hepatocellular Carcinoma Using an Integrated Statistical and Bioinformatic Approach, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, vol.22 no.4 pp.1632-1648, 2021
2021	Shao-Hua Yu、Jia-Hua Cai、De-Lun Chen、Szu-Han Liao、Yi-Zhen Lin、Yu-Ting Chung、Jeffrey J. P. Tsai、Charles C.N. Wang, LASSO and Bioinformatics Analysis in the Identification of Key Genes for Prognostic Genes of Gynecologic Cancer, Journal of Personalized Medicine, vol.11 no.11 pp.1177-1189, 2021
2020	Chien-Hung Huang、Efendi Zaenudin、Jeffrey J. P. Tsai、Nilubun Kurubanjerdjit、Eskezeia Dessie、Ka-Lok Ng, Dissecting Moleculor Network Structures Using a Network Subgraph Approach., PeerJ Computer Science, vol.8 pp.e9556-e9585, 2020
2020	Hsien-Ju Ko、Jeffrey J. P. Tsai, Robust and Computationally Efficient Digital IIR Filter Synthesis and Stability Analysis under Finite Precision Implementations, IEEE TRANSACTIONS ON SIGNAL PROCESSING, vol.68 pp.1807-1822, 2020
2020	Chia Ying Li、Jia-Hua Cai、Jeffrey J. P. Tsai、Charles C.N. Wang, Identification of Hub Genes Associated with Development of Head and Neck Squamous Cell Carcinoma by Integrated Bioinformatics Analysis, Frontiers in Oncology, vol.10 pp.681-692, 2020
2020	Yan Zhuang、Lincoln R. Sheets、Yin-Wu Chen、Zon-Yin Shae、Jeffrey J. P. Tsai、Chi-Ren Shyu, A Patient-Centric Health Information Exchange Framework Using Blockchain Technology, IEEE Journal of Biomedical and Health Informatics, vol.24 no.8 pp.2169-2176, 2020
2020	Hsuan-Jen Lin、Phillip C.Y. Sheu、Jeffrey J. P. Tsai、Che-Yi Chou、Charles C.N. Wang, Text Mining in literature review of urothelial cancer using topic model, BMC CANCER, vol.20 no.1 pp.462-468, 2020
2020	Charles C.N. Wang、Jennifer Jin、Jan-Gowth Chang、Masahiro Hayakawa、Atsushi Kitazawa、Jeffrey J. P. Tsai、Phillip C.Y. Sheu, Identification of Most Influential Co-occurring Gene Suites for Gastrointestinal Cancer Using Biomedical Literature Mining and Graph-based Influence Maximization, BMC Medical Informatics and Decision Making, vol.20 no.1 pp.208-219, 2020
2019	Ing-Ray Chen、Jia Guo、Ding-Chau Wang、Jeffrey J. P. Tsai、Hamid Al-Hamadi、Ilsun You, Trust-based Service Management for Mobile Cloud IoT Systems, IEEE Transactions on Network and Service Management, vol.16 pp.246-263, 2019
2019	Jia Guo、Ing-Ray Chen、Ding-Chau Wang、Jeffrey J. P. Tsai、Hamid AI-Hamadi, Trust-Based IoT Cloud Participatory Sensing of Air Quality, WIRELESS PERSONAL COMMUNICATIONS, vol.105 no.4 pp.1461-1474, 2019
2019	Charles C.N. Wang、Chia-Ying Li、Jia-Hua Cai、Phillip C.Y. Sheu、Jeffrey J. P. Tsai、Meng-Yu Wu、Chia-Jung Li、Ming-Feng Hou, Identification of Prognostic Candidate Genes in Breast Cancer by Integrated Bioinformatic Analysis, Journal of Clinical Medicine, vol.8 no.8 pp.1160-1173, 2019
2019	Po-Yen Ko、Ling-Ling Wang、Yi-Jiun Chou、Jeffrey J. P. Tsai、Su-Hua Huang、Chih-Ping Chang、Yi-Tzon Shiao、Jen-Jyh Lin, Usefulness of Therapeutic Hypothermia to Improve Survival in Out-of-Hospital Cardiac Arrest, Acta Cardiologica Sinica, vol.35 no.4 pp.394-401, 2019
2018	Ji Wang、Ing-Ray Chen、Jeffrey J. P. Tsai、Ding-Chau Wang, Trust-based Mechanism Design for Cooperative Sepctrum Sensing in Cognitive Radio Networks, Proceedings of ACM SIGCOMM 2005 Workshops: Conference on Computer Communications, vol.116 pp.90-100, 2018
2018	Y. Wang、I.R. Chen、J.H. Cho、A. Swami、Y.C. Lu、C.T. Lu、Jeffrey J. P. Tsai, CATrust: Context-Aware Trust Management for Service-Oriented Ad Hoc Networks, IEEE Transactions on Services Computing, vol.11 no.6 pp.908-921, 2018
2017	Y. Wang,、I.R. Chen、J.H. Cho、J. J. P. Tsai, Trust-Based Task Assignment with Multi-Objective Optimization in Service-Oriented Ad Hoc Networks, IEEE Transactions on Network and Service Management, vol.14 pp.217-232, 2017
2017	J. Guo、I.R. Chen、J. J. P. Tsai, A Survey of Trust Computation Models for Internet of Things Systems, COMPUTER COMMUNICATIONS, vol.97 pp.1-14, 2017
2017	Pi-Chou Hsieh、Hui-Ting Lin、Wen-Yih Chen、Jeffrey J. P. Tsai、Wen-Pin Hu, The Combination of Computational and Biosensing Technologies for Selecting Aptamer against Prostate Specific Antigen, Biomed Research International, vol.2017, 2017
2017	Shun-Tsung Chen、Chien-Hung Huang、Victor C. Kok、Jin-Shuei Ciou、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Chi-Ying F Huang、Ka-Lok Ng, Drug Repurposing and Therapeutic Anti-MicroRNA Predictions in Oxidized Low-Density Lipoprotein-Induced the Proliferation of Vascular Smooth Muscle Cell Associated Diseases, Journal of Bioinformatics and Computational Biology, vol.15 no.1 pp.1-23, 2017
2016	Harika Meduru、Yeng-Tseng Wang、Jeffrey J. P. Tsai、Yu-Ching Chen, Finding a Potential Dipeptidyl Peptidase-4 (DPP-4) Inhibitor for Type-2 Diabetes Treatment Based on Molecular Docking, Pharmacophore Generation, and Molecular Dynamics Simulation, INTERNATIONAL JOURNAL OF MOLECULAR SCIENCES, vol.17 pp.920-931, 2016
2016	David Agustriawan、Chien-Hung Huang、Jim Jinn-Chyuan Sheu、Shan-Chih Lee、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Ka-Lok Ng, DNA Methylation-regulated MicroRNA Pathways in Ovarian Serous Cystadenocarcinoma: a Meta-analysis, COMPUTATIONAL BIOLOGY AND CHEMISTRY, vol.65 pp.154-164, 2016
2016	Chien-Hung Huang、Jin-Shuei Ciou、Shun-Tsung Chen、Victor C. Kok、Yi Chung、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Chi-Ying F. Huang、Ka-Lok Ng, Identify Potential Drugs for Cardiovascular Diseases Caused by Stress-induced Genes in Vascular Smooth Muscle Cells, PeerJ, vol.4 pp.e2478-e2511, 2016
2015	Yu-Ching Chen、Victor C Kok、Ching-Hsuan Chien、Jorng-Tzong Horn、Jeffrey J. P. Tsai, Cancer Rick in Patients Aged 30 Years and above with Type 2 Diabetes Receiving Antidiabetic Monotherapy: A Cohort Study Using Metformin as the Comparator, Therapeutics and Clinical Risk Management, vol.11 no.13 pp.1315-1323, 2015
2015	Chien-Hung Huang、Jin-Shuei Ciou、Shun-Tsung Chen、Ke-Rung Tzeng、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Ka-Lok Ng, Using Time-course Data to Identify Stress- and LDL-induced MicroRNA Target Genes for Vascular Smooth Muscle Cells, Engineering Letters, vol.23 no.4 pp.307-311, 2015
2015	Wen-Tsong Hsieh、Ke-Rung Tzeng、Jin-Shuei Ciou、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Chien-Hung Huang、Ka-Lok Ng, Transcription Factor and MicroRNA-regulated Network Motifs for Cancer and Signal Transduction Networks, BMC Systems Biology, vol.9 Suppl 1 no.Suppl 1 pp.S5-S16, 2015
2015	Charles C. N. Wang、Phillip C. Y. Shen、Hiroshi Yamaguchi、Jeffrey J. P. Tsai, Towards Semantic Biomedical Problem Solving, International Journal of Semantic Computing, vol.9 no.4 pp.415-431, 2015
2015	Ke Hao、Phillip C. Y. Shen、Jeffrey J. P. Tsai, KSOS-An Operating System for Knowledge Societies, International Journal of Semantic Computing, vol.9 no.4 pp.483-502, 2015
2014	Charles C.N. Wang、Pei-Chun Chang、Ka-Lok Ng、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, A Model Comparison Study of the Flowering Time Regulatory Network in Arabidopsis, BMC Systems Biology, vol.8 pp.15-26, 2014
2014	R. M. Chen、Y. J. Wu、S. R. Jhuang、M. H. Hsieh、C. L. Kuo、Y. L. Ma、R. M. Hu、Jeffrey J. P. Tsai, A Computer-aided System for Discriminating Normal from Cancerous Regions in IHC Liver Cancer Tissue Images Using K-means Clustering, WSEAS Transactions on Computers, vol.11 pp.29-34, 2014
2014	Nilubon Kurubanjerdjit、Jeffrey J. P. Tsai、Chien-Hung Huang、Ka-Lok Ng, Disturbance of A. thaliana microRNA-regulated pathways by Xcc bacterial effector proteins, AMINO ACIDS, vol.46 no.4 pp.953-961, 2014
2014	Nilubon Kurubanjerdjit、Jin-Shuei Ciou、Ke-Rung Tzeng、Ching-Yi Chen、Jeffrey J. P. Tsai、Chien-Hung Huang、Ka-Lok Ng, The Role of A. thaliana MicroRNA-Regulated Protein-Protein Interaction Networks in Plant-Pathogen Interaction Study, IAENG International Journal of Computer Science, vol.41 no.2 pp.141-147, 2014
2013	J. W. Lu、J. G. Chang、K. T. Yeh、R. M. Chen、Jeffrey J. P. Tsai、Su, W. W、Rouh-Mei Hu, Clinical Implications of Deregulated CDK4 and Cyclin D1 Expression in Patients with Human Hepatocellular Carcinoma, MEDICAL ONCOLOGY, vol.30 no.1 pp.379-388, 2013
2013	Wei-Liang Tai、Charles C.N. Wang、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Data Hiding in DNA for Authentication of Plant Variety Rights, Journal of Electronic Science and Technology, vol.11 no.1 pp.38-43, 2013
2013	Nilubon Kurubanjerdjit、Jeffrey J. P. Tsai、Phillip C.Y. Sheu、Ka-Lok Ng, The Prediction of Protein-Protein Interaction of A. Thaliana and X. Campestris Pv. Campestris Based on Protein Domain and Interolog Approaches, Plant Omics, vol.6 no.6 pp.388-398, 2013
2013	Nilubon Kurubanjerdjit、Chien-Hung Huang、Yuliang Lee、Jeffrey J. P. Tsai、Ka-Lok Ng, Prediction of microRNA-regulated protein interaction pathways in Arabidopsis using machine learning algorithms, Computers in Biology and Medicine, vol.43 no.11 pp.1645-1652, 2013
2012	Yang, Tsuey-Ching、Tzu-Fan Che、Jeffrey J. P. Tsai、Rouh-Mei Hu, AmpG is required for the BlaXc beta-lactamase expression in Xanthomonas campestris pv. campestris str.17, FEMS MICROBIOLOGY LETTERS, vol.340 no.2 pp.101-108, 2012
2011	Stephen J. H. Yang、Jia Zhang、Addison Y. S. Su、Jeffrey J. P. Tsai, A Collaborative Multimedia Annotation Tool for Enhancing Knowledge Sharing in CSCL, INTERACTIVE LEARNING ENVIRONMENTS, vol.19 no.1 pp.45-62, 2011
2011	Chen-Wei Hsiao、Rouh-Mei Hu、Wei-Liang Tai、Rong-Ming Chen、Jeffrey J. P. Tsai, Object Relational Programming of Biomedical Images, IEEE BIBE 2011 pp.52-57, 2011
2011	Jing-Gung Chung、Jeffrey J. P. Tsai、Chien-Yih Lin、Yang-Chia Shih、Jin-Shih Chen、Ming-Jen Fan, The application of molecular markers to identify edible fungi-A case study of Tremella fuciformis, IEEE BIBE 2011 pp.213-220, 2011
2011	Chun-Ming Chang、Jeffrey J. P. Tsai, Ergonomic Designs Based on Musculoskeletal Models, IEEE BIBE 2011 pp.112-116, 2011
2011	Yu-Liang Lee、Jie-Wei Weng、Wen-Chin Chiang、Yi-Wen Lin、Ka-Lok Ng、Jeffrey J. P. Tsai、Chi-Ying Huang, Investigating Cancer-related Proteins Specific Domain Interactions and Differential Protein Interactions caused by Alternative Splicing, IEEE BIBE 2011 pp.33-38, 2011
2011	David A. Hecht、Charles C.N. Wang、Rouh-Mei Hu、Jeffrey J. P. Tsai, Molecular Modeling Studies of AmpR Mediated AmpC β-Lactamase Repression, IEEE BIBE 2011 pp.195-200, 2011
2011	Chao-Neng Wang、Ka-Lok Ng、Yu-Ching Chen、Jeffrey J. P. Tsai, Simulation of Bacterial Chemotaxis by the Random Run and Tumble Model, IEEE BIBE 2011, 2011
2011	Ming-Jen Fan、Su-May Yu、Tzu-Chieh Hung、Wei-Quan Chen、Yue-Ie Hsing、Hsin-Li Lin、Chia-Cheng Liu、Jing-Gung Chung、Jeffrey J. P. Tsai, TTRSIS: A cloud computing platform for rice functional genomics research through a reverse genetics approach, IEEE BIBE 2011 pp.221-227, 2011
2011	Tsuey-Ching Yang、Mei-Jung Tsa、Jeffrey J. P. Tsai、Rouh-Mei Hu, Induction of a secretable beta-lactamase requires a long lag time in Xanthomonas campestris pv. campestris str. 17, RESEARCH IN MICROBIOLOGY, vol.162 no.10 pp.999-1005, 2011
2011	R. M. Chen、M. T. Hou、N. W. Chang、Y. T. Chen、Jeffrey J. P. Tsai, Cumulative Spectral Repeat Finder (CSRF): A Spectral Approach for Identifying the Length of Repeats in DNA Sequences, International Journal on Artificial Intelligence Tools, vol.20 no.1 pp.179-194, 2011
2011	Jeng-Wei Lu、Jan-Gowth Chang、Kun-Tu Yeh、Rong-Ming Chen、Jeffrey J. P. Tsai、Wei-Wen Su、Rouh-Mei Hu, Increased expression of PRL-1 protein correlates with shortened patient survival in human hepatocellular carcinoma, Clinical & Translational Oncology, vol.14 pp.287-293, 2011
2010	Jeng-Wei Lu、Jan-Gowth Chang、Kun-Tu Yeh、Rong-Ming Chen、Jeffrey J. P. Tsai、Rouh-Mei Hu, Decreased expression of p39 is associated with a poor prognosis in human hepatocellular carcinoma, MEDICAL ONCOLOGY, vol.28 pp.S239-S245, 2010
2010	Jeffrey J. P. Tsai、Phillip C.Y. Sheu、Chen-Wei Hsiao, Special Issue on Selected Papers from the 9th IEEE International Conference on Bioinformatics and Bioengineering (BIBE2009) PREFACE, International Journal on Artificial Intelligence Tools, vol.19 no.3 pp.233-234, 2010
2010	S. Ikeda、P. Sheu、Jeffrey J. P. Tsai, A Model for Object Relational OLAP, International Journal on Artificial Intelligence Tools, vol.19 no.5 pp.551-595, 2010
2010	Angus F.M. Huang、Stephen J.H. Yang、Minhong Wang、Jeffrey J. P. Tsai, Improving Fuzzy Knowledge Integration with Particle Swarm Optimization, EXPERT SYSTEMS WITH APPLICATIONS, vol.37 no.12 pp.8770-8783, 2010
2009	S. Yang、J. Zhang、Jeffrey J. P. Tsai、A. Huang, SOA-based Content Delivery Model for Mobile Internet Navigation, International Journal on Artificial Intelligence Tools, vol.18 no.1 pp.141-161, 2009
2009	Y. Wang、W. Kinser、J. Anderson、D. Zhang、Y. Yao、P. Sheu、Jeffrey J. P. Tsai、W. Pedrycz、J. Latombe、L. Zadeh, A Doctrine of Cognitive Informatics, Fundamenta Informaticae, vol.90 no.3 pp.203-228, 2009
2009	Jeffrey J. P. Tsai、A. Liu, Experience on Knowledge-based Software Engineering: A Logic-based Requirements Language and its Industrial Applications, Journal of Systems and Software, vol.82 no.10 pp.1578-1587, 2009
2009	S. Yang、J. Zhang、L. Lin、Jeffrey J. P. Tsai, Improving Peer-to-Peer Performance through Intelligent Social Search, EXPERT SYSTEMS WITH APPLICATIONS, vol.36 no.7 pp.10312-10324, 2009
2008	L. Ma、Jeffrey J. P. Tsai, Formal Modeling and Analysis of Secure Mobile Agent Systems, IEEE TRANSACTIONS ON SYSTEMS MAN AND CYBERNETICS PART A-SYSTEMS AND HUMANS, vol.38 no.1 pp.180-196, 2008
2008	Zhenwei Yu、Jeffrey J. P. Tsai、Thomas J. Weigert, An Adaptive Automatically Tuning Intrusion Detection System, ACM Transactions on Autonomous and Adaptive Systems, vol.3 no.3 pp.1-25, 2008
2007	C.H. Huang、J.F. Fang、Jeffrey J. P. Tsai、K.L. Ng, Topical Robustness of the Protein-protein Interaction Networks, Lecture Notes in Bioinformatics, vol.4023 pp.166-177, 2007
2007	Shangping Ren、Yue Yu、Nianen Chen、Jeffrey J. P. Tsai、Kevin Kwiat, The Role of Roles in Supporting Reconfigurability and Fault Localizations for Open Distributed and Embedded Systems, ACM Transactions on Autonomous and Adaptive Systems, vol.2 no.3 pp.10-es, 2007
2007	S.P. Ren、Y. Yu、K. Kwiat、Jeffrey J. P. Tsai, A Coordination Model for Improving Software System Attack-tolerance and Survivability in Open Hostile Environments, International Journal of Distributed Sensor Networks, vol.3 no.2 pp.175-199, 2007
2007	Jeffrey J. P. Tsai, Sensor Networks, Ubiquitous and Trustworthy Computing, International Journal of Distributed Sensor Networks, vol.3 no.2 pp.135-136, 2007
2006	Ka-Lok Ng、C. H. Huang、P. H. Lee、J. F. Fang、Jeffrey J. P. Tsai, Modular structures and robustness of protein networks, International Journal on Artificial Intelligence Tools, vol.15 no.2 pp.309-322, 2006
2006	Z. Yu、Jeffrey J. P. Tsai, Fuzzy model tuning for Intrusion Detection Systems, International Journal on Artificial Intelligence Tools, vol.15 no.5 pp.693-694, 2006
2006	H.W. Hsiao、W.H. Hsiao、C.K. Hsu、Jeffrey J. P. Tsai, A Novel Feature with Dynamic Time Warping and Least Squares Adjustment for Protein Structure Alignment, Asian Journal of Health and Information Sciences, vol.1 no.3 pp.261-275, 2006
2006	Z. Yu、Jeffrey J. P. Tsai, An Efficient Intrusion Detection System using Boosting -Based Learning Algorithm, International Journal of Computer Applications in Technology, vol.27 no.4 pp.223-231, 2006
2006	H.K. Chen、C.S. Fahn、Jeffrey J. P. Tsai、M. B. Lin, A Novel Cache-based Approach to Large Polygonal Mesh Simplification, Journal of Information Science and Engineering, vol.22 no.4 pp.843-861, 2006
2006	W.F. Huang、R.M. Chen、R.M. Hu、Jeffrey J. P. Tsai, Searching the Regulatory Protein Binding Site by Steepest Ascent Algorithm, Asian Journal of Health and Information Sciences, vol.1 no.1 pp.122-133, 2006
2006	Y.K. Cheng、C.H. Lin、W. C. Chang、G. Y. Hwang、S.W. Tsai、L. Wan、M. H. Tsai、J. J. P. Tsai、F. J. Tsai, Increased Prevalence of Interleukin-1 Receptor Antagonist Gene Polymorphism in Patients With Chronic Rhinosinusitis, ARCHIVES OF OTOLARYNGOLOGY-HEAD & NECK SURGERY, vol.132 pp.285-290, 2006
2005	Jeffrey J. P. Tsai、D. Zhang, Software Engineering Support for Bioinformatics, International Journal of Software Engineering and Knowledge Engineering, vol.15 no.3 pp.473-474, 2005
2005	R.M. Chen、F. M. Liu、Jeffrey J. P. Tsai, A Software Architecture for Finding Motifs using Genetic Algorithm, International Journal of Software Engineering and Knowledge Engineering, vol.15 no.3 pp.571-585, 2005
2005	C.C. Lee、R.M. Chen、Jeffrey J. P. Tsai, A Bioinformatics Approach for Predicting the Lengths of Motifs, 健康管理學刊, vol.3 no.2 pp.179-187, 2005
2005	C.T. Peng、K.H. Wu、S.J. Lan、Jeffrey J. P. Tsai、F.J. Tsai、C.H. Tsai, Amino Acid Concentrations in Cerebrospinal Fluid in Children with Acute Lymphoblastic Leukemia undergoing Chemotherapy, EUROPEAN JOURNAL OF CANCER, vol.41 no.8 pp.1158-1163, 2005
2004	C. M. Huang、C. H. Tsai、Jeffrey J. P. Tsai、P.T. Kung、C. L. Chen、F. J. Tsai, The Relationship between Insulin-like Growth Factor-II Gene Apa I Polymorphism and Rheumatoid Arthritis, SCANDINAVIAN JOURNAL OF RHEUMATOLOGY, vol.33 no.2 pp.126-127, 2004
2004	Y. Deng、X. He、J. Wang、Jeffrey J. P. Tsai, Constraint Propagation and Progressive Verification for Component-based Process Model, International Journal of Software Engineering and Knowledge Engineering, vol.14 no.5 pp.471-496, 2004
2004	Y. Yang、M.T. Kao、S.Y. Chung、C.M. Chen、Jeffrey J. P. Tsai、J.G. Chang, Glutathione S-transferase T1 Deletion is a Factor for Developing End-stage Renal Disease in Diabetic Patients, INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE, vol.14 no.5 pp.855-859, 2004
2003	I.C. Chou、C.C. Lee、C.C. Huang、J.Y. Wu、Jeffrey J. P. Tsai、C.H. Tsai、F.J. Tsai, Association of the Neuronal Nicotinic Acetylcholine Receptor Subunit Alpha4 Polymorphisms with Febrile Convulsions, EPILEPSIA, vol.44 no.8 pp.1089-1093, 2003
2003	L. W. Hang、T. H. Hsia、W.C. Chen、H. Y. Chen、Jeffrey J. P. Tsai、F. J. Tsai, Interleukin-10 Gene -627 Allele Variants, not Interleukin-I Beta Gene and Receptor Antagonist Gene Polymorphisms, are Associated with Atopic Bronchial Asthma, JOURNAL OF CLINICAL LABORATORY ANALYSIS, vol.17 no.5 pp.168-173, 2003
2003	S.S. Sun、F.Y. Liu、Jeffrey J. P. Tsai、R.F. Yen、C.H. Kao、W.S. Huang, A Pilot Trial of Quantitative Tc-99m HMPAO and Ga-67 Citrate Lung Scans to Detect Pulmonary Endothelial Damage and Lung Inflatammation in Patients of Collagen Vascular Diseases with Active Diffuse Infiltrative Lung Disease, RHEUMATOLOGY INTERNATIONAL, vol.23 no.6 pp.301-301, 2003
2003	I.C. Chou、C.T. Peng、C.C. Huang、Jeffrey J. P. Tsai、F.J. Tsai、C.H. Tsai, Association Analysis of γ2 Subunit of γ-Aminobutyric Acid Type A Receptor Polymorphisms with Febrile Seizures, PEDIATRIC RESEARCH, vol.54 no.1 pp.26-29, 2003
2003	M. T. Kao、Y. C. Shiau、Jeffrey J. P. Tsai、J. J. Wang、S. T. Ho、A. Kao, Evaluating the Changes in Alveolar Permeability and Lung Ventilation in Patients with Chronic Renal Failure after Haemodialysis using 99mTc-DTPA Radioaerosol Inhalation Lung Scan, NUCLEAR MEDICINE COMMUNICATIONS, vol.24 no.7 pp.825-828, 2003
2003	C. H. Huang、F.Y. Liu、R.S.C. Wu、Jeffrey J. P. Tsai、C.C. Lin、A. Kao, The Influence of Volatile Anesthetics on Alveolar Epithelial Permeability Measured by Noninvasive Radionuclide Lung Scan, Annals of Nuclear Medicine and Sciences, vol.17 no.3 pp.213-218, 2003
2003	D. Zhang、Jeffrey J. P. Tsai, Machine Learning and Software Engineering, SOFTWARE QUALITY JOURNAL, vol.11 no.2 pp.87-119, 2003
2003	Y. Deng、J. Wang、Jeffrey J. P. Tsai、K. Beznosov, An Approach for Modeling and Analysis of Security System Architecture, IEEE Transactions on Knowledge and Data Engineering, vol.15 no.5 pp.1099-1119, 2003
2003	Jeffrey J. P. Tsai、E. Juan、A. Sahay, Model and Algorithm for Verification of High-Assurance Properties of Real-Time Systems, IEEE Transactions on Knowledge and Data Engineering, vol.15 no.2 pp.405-422, 2003
2003	S. Yang、Jeffrey J. P. Tsai、C. C. Chen, Fuzzy Rule Base Systems Verification Using High Level Petri Nets, IEEE Transactions on Knowledge and Data Engineering, vol.15 no.2 pp.457-473, 2003
2002	S. J.H. Yang、Jeffrey J. P. Tsai、C.H. Chu, Development of Wireless Embedded Systems Using Component Based Software, International Journal of Software Engineering and Knowledge Engineering, vol.12 no.2 pp.135-154, 2002
2001	E. Juan、Jeffrey J. P. Tsai、T. Murata、Y. Zhou, Reduction Methods for Real-Time Systems Using Delay Time Petri Nets, IEEE Transactions on Software Engineering, vol.27 no.5 pp.422-448, 2001
2000	Z.Wang、Jeffrey J. P. Tsai, Fault-toleration by Duplication and Debugging for Distributed Real-Time Systems, Tamkang Journal of Science and Engineering, vol.3 no.3 pp.173-186, 2000
2000	D. Kadamuddi、Jeffrey J. P. Tsai, Clustering Algorithm for Parallelizing Software Systems in Multi-Processors Environment, IEEE Transactions on Software Engineering, vol.26 no.4 pp.340-361, 2000

Year	Book Title
2021	Jeffrey J. P. Tsai、Huei-Chen Ko, 大學的社會實踐和永續創新：由阿罩霧出發的SDGs故事(Innovation and Sustainability: Asia University SDGs Stories in Wufeng), China Times Publishing Co, Aug. 2021
2019	Jeffrey J. P. Tsai、Ka-Lok Ng, Application of Omics, AI and Blockchain in Bioinformatics Research, World Scientific Inc., Oct. 2019
2018	Charles C. N. Wang、Jeffrey J. P. Tsai, Semantic Computing,, Sharing Semanic Use of semantics in Bio-Informatics, Semantic Computing, World Scientific Inc., Jan. 2018
2018	Charles C. N. Wang、Jeffrey J. P. Tsai, Encyclopedia with Semantic Computing and Robotic Intelligence, Sharing Semanic Use of semantics in Medical Informatics, World Scientific Inc., Jan. 2018
2018	Charles C. N. Wang、I-Seng Cheng、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Encyclopedia with Semantic Computing and Robotic Intelligence, Sharing Semanic a Semantic Computing for Cancer Recommendation in Human Robot Interaction, World Scientific Inc., Jan. 2018
2017	Jeffrey J. P. Tsai、Ka-Lok Ng, Computational Methods with Applications in Bioinformatics Analysis, World Scientific Inc., Aug. 2017
2017	Charles C. N. Wang、Jeffrey J. P. Tsai, Encyclopedia with Semantic Computing and Robotic Intelligence, Sharing Use of semantics in Bio-Informatics, World Scientific Inc., Jan. 2017
2017	Charles C. N. Wang、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Computational Methods with Applications in Bioinformatics Analysis, Sharing Semanic Analytics of Biomedical Data, World Scientific Inc., Jan. 2017
2017	Jeffrey J. P. Tsai, 諾貝爾大師的世界觀(The World Views of Nobel Laureates), 天下文化, Jan. 2017
2016	Jeffrey J. P. Tsai, 創新世代12個人文思維(Humanities in the Age of Innovation: 12 Approaches), 天下文化, Apr. 2016
2012	Eric Y.T. Juan、Jeffrey J. P. Tsai, Compositional Verification of Concurrent and Real-Time Systems, Springer/Kluwer, Dec. 2012
2011	C. Y. Hsu、Rouh-Mei Hu、R. M. Chen、J. W. Ou、Jeffrey J. P. Tsai, Biomedical Engineering: Health Care Systems, Technology and Techniques, IHCREAD: An Automatic Immunohistochemistry Image Analysis Tool, Springer, Jan. 2011
2011	C. C. Wu、R. M. Chen、Jeffrey J. P. Tsai, Biomedical Engineering: Health Care Systems, Technology and Techniques, Sharing Cancer-related Genes Research Resources on Peer-to-Peer Network, Springer, Jan. 2011
2011	J. W. Ou、R. M. Chen、R. M. Hu、C. Y. Hsu、Jeffrey J. P. Tsai, Biomedical Engineering: Health Care Systems, Technology and Techniques, A Systematic Gene Expression Explorer Tool for Multiple and Paired Chips, Springer, Jan. 2011
2011	C. Y. Hsu、R. M. Hu、R. M. Chen、J. W. Ou、Jeffrey J. P. Tsai, Biomedical Engineering: Health Care Systems, Technology and Techniques, IHCREAD: An Automatic Immunohistochemistry Image Analysis Tool, Springer, Jan. 2011
2011	C. C. Wu、R. M. Chen、Jeffrey J. P. Tsai, Biomedical Engineering: Health Care Systems, Technology and Techniques, Sharing Cancer-related Genes Research Resources on Peer-to-Peer Network, Springer, Jan. 2011
2011	Z. Yu、Jeffrey J. P. Tsai, Intrusion Detection: A Machine Learning Approach, Imperial College Press, Jan. 2011
2009	Jeffrey J. P. Tsai、Philip S. Yu, Machine Learning in Cyber Trust: Security, Privacy, and Reliability, Springer, Apr. 2009
2009	S.P. Ren、K. Kwiat、Jeffrey J. P. Tsai, Machine Learning in Cyber Trust: Security, Privacy, and Reliability, A Non-Intrusive Approach to Enhance Legacy Embedded Control Systems with Cyber Protection features, Springer-Verlag, Jan. 2009
2008	M. Singhal、G. Serugendo、Jeffrey J. P. Tsai、W. Lee、K. Romer、Y. Tseng, Sensor Networks, Ubiquitous and Trustworthy Computing, IEEE Computer Society Press, Jun. 2008
2008	A. Liu、Jeffrey J. P. Tsai, Encyclopedia of Computer Science and Engineering Engineering, Computer System Monitoring, John Wiley & Sons Inc., Jan. 2008
2007	Du Zhang、Jeffrey J. P. Tsai, Advances in Machine Learning Applications in Software Engineering, IGI Publishing Inc., PA, Feb. 2007
2007	S. Ren、Jeffrey J. P. Tsai、O. Frieder, Advances in Machine Learning Application in Software Engineering, Adding Context into Access Control Model for Computer Security Policy, IGI Publishing Inc., Jan. 2007
2007	C. Kersey、Z. Yu、Jeffrey J. P. Tsai, Wireless Ad Hoc Networking: Personal-Area, Local-Area, and Sensory-Area Networks, Intrusion Detection Techniques for Wireless Networks, Taylor & Francis, Jan. 2007
2007	S. Ren、Jeffrey J. P. Tsai、O. Frieder, Advances in Machine Learning Application in Software Engineering, Adding Context into Access Control Model for Computer Security Policy, IGI Publishing Inc., Jan. 2007
2006	A. Liu、Jeffrey J. P. Tsai, Encyclopedia of Computer Science and Engineering, Software Monitoring, Wiley Interscience, Jan. 2006
2006	J. Ma、H. Jin、L. T. Yang、Jeffrey J. P. Tsai, Ubiquitous Intelligence and Computing, Springer-Verlag, New York, Jan. 2006
2006	Lu Ma、Jeffrey J. P. Tsai, Security Modeling and Analysis of Mobile Agent Systems, Series in Electrical and Computer Engineering Vol. 5, Imperial College Press, London, Jan. 2006
2005	Du Zhang、Jeffrey J. P. Tsai, Machine Learning Application in Software Engineering, World Scientific Inc. Publishers, New Jersey, Feb. 2005
2005	L. Ma、Jeffrey J. P. Tsai, Handbook of Software Engineering and Knowledge Engineering, Vol. III, Attacks and Countermeasure in Software System Security, World Scientific Pub. Co., Jan. 2005
2002	L. Ma、Jeffrey J. P. Tsai, Handbook of Software Engineering and Knowledge Engineering, Vol. I, Formal Verification Techniques for Computer Communication Security Protocol, Vol. III, Jan. 2002
2002	E. Juan、Jeffrey J. P. Tsai, Compositional Verification of Concurrent and Real-Time Systems, Springer/Kluwer, Jan. 2002
2001	Jeffrey J. P. Tsai、B. Li, Hybrid Parallel Execution Model for Logic-Based Specification Languages, World Scientific Pub. Inc.New Jersey, Jan. 2001
1999	Jeffrey J. P. Tsai、E. Juan、A. Sahay、D. Zhang, Encyclopedia of Electrical and Electronics Engineering, Knowledge Verification, John Wiley & Sons Inc., Jan. 1999
1999	A. Liu、Jeffrey J. P. Tsai, Encyclopedia of Electrical and Electronics Engineering, Computer System Monitoring, John Wiley & Sons Inc., Jan. 1999
1996	Jeffrey J. P. Tsai、Y. Bi、S. Yang、R. Smith, Distributed Real-Time Systems: Monitoring, Visualization, Debugging, and Analysis, Wiley & Sons Inc, Jan. 1996
1993	Jeffrey J. P. Tsai、T. Weigert, Knowledge-Based Software Development for Real-Time Distributed Systems, World Scientific Inc. Publishers, New Jersey, Dec. 1993
1993	Jeffrey J. P. Tsai、S. Yang, Monitoring and Debugging Distributed Real-Time Systems, IEEE Computer Society Press, Nov. 1993
1993	Jeffrey J. P. Tsai、S. J.H. Yang、N. Waheed, T. Moher, Knowledge Engineering Shells: Systems and Techniques (Advances Series in Artificial Intelligence), Development of Expert Systems Shells, World Scientific Inc., Jan. 1993
1992	Jeffrey J. P. Tsai、R. Sheu, The Next Generation of Information Systems: from Data to Knowledge, Lecture Notes in Artificial Intelligence, A Distributed Cooperative Agents Architecture for Software Development, Springer-Verlag, Jan. 1992
1992	Jeffrey J. P. Tsai、H. Jang, Advances Series in Artificial Intelligence, A Knowledge-Based Approach for the Specification and Analysis of Real-Time Systems, World Scientific Inc., Jan. 1992

Date of Publication	Paper Title
2021.12	Zon-Yin Shae、Jeffrey J. P. Tsai, On the Design of Medical Data Ecosystem for Improving Healthcare Research and Commercial Incentive , Proceedings of the Third IEEE International Conference on Cognitive Machine Intelligence (IEEE CogMI), Dec. 2021, Virtual Conferenc
2021.02	Eskezeia Y Dessie、 Jeffrey J. P. Tsai、Jan-Gowth Chang、Ka-Lok Ng, A novel miRNA, based classification model of risks and stages for clear cell renal cell carcinoma patients - Proceedings of the 19th Asia Pacific Bioinformatics Conference (APBC), Feb. 2021, National Cheng Kung University, Tainan, Taiwan
2021.01	D. Bulterman、A. Kitazawa、D Ostrowski、P Sheu、Jeffrey J. P. Tsai, Message from the General Chairs ICSC 2021 , Proceedings of 2021 IEEE 15th International Conference on Semantic Computing (IEEE ICSC), Jan. 2021, Laguna Hills, CA, USA
2020.11	Yan Zhuang、Lincoln Sheets、Zon-Yin Shae、Jeffrey J. P. Tsai、Chi-Ren Shyu, Development of A Blockchain Framework for Virtual Clinical Trials , Proceedings of the AMIA 2020 Virtual Annual Symposium, Nov. 2020, San francisco
2020.10	Zon-Yin Shae、Jeffrey J. P. Tsai, Deep Learning Mechanism for Pervasive Internet Addiction Prediction , Proceedings of the Second IEEE International Conference on Cognitive Machine Intelligence (IEEE CogMI), Oct. 2020, Atlanta, GA, USA
2019.12	Zon-Yin Shae、Zhi-Ren Tsai、Chi-Yu Chang、Jeffrey J. P. Tsai, Random Sampling Deep Learning Mechanism for Discovering Unique Property of No Specific Local Feature Images , Proceedings of the 2019 IEEE First International Conference on Cognitive Machine Intelligence (CogMI), Dec. 2019, Los Angeles, CA, USA
2019.10	James K. S. Wong、You-Zh Lin、Jeffrey J. P. Tsai、Charles C.N. Wang, Machine Learning Classification Algorithms on Treadmill Exercise Data for Predicting Significant Coronary Artery Disease , The First International Symposium on Future ICT (Future ICT 2019), Oct. 2019, Taichung City, Taiwan
2019.07	Zon-Yin Shae、Jeffrey J. P. Tsai, AI Blockchain Platform for Trusting News , Proceedings of the 2019 IEEE International Conference on Distributed Computing Systems(ICDCS), Jul. 2019, Dallas, Texas
2018.11	Yan Zhuang、Lincoln Sheets、Zon-Yin Shae、Jeffrey J. P. Tsai, Applying Blockchain Technology for Health Information Exchange and Persistent Monitoring for Clinical Trials , Proceedings of the AMIA 2018 Annual Symposium, Nov. 2018, San francisco
2018.10	His-Chung Kung、Jeffrey J. P. Tsai、Rong-Ming Chen、Rouh-Mei Hu, Stratification of Human Gut Microbiome and Building a SVM, Based Classifier - Proceedings of the 18th IEEE International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2018, Taichung, Taiwan
2018.10	Eskezeia Y. Dessie、Ezra B. Wijaya、Chien-Hung Huang、David Agustriawan、Jeffrey J. P. Tsai、Ka-Lock Ng, Identification of Several Core Overexpressed MicroRNAs that Could Predict Survival in Patients with Ovarian Cancer , Proceedings of the 18th IEEE International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2018, Taichung, Taiwan
2018.10	Ming-Yi Yen、Hsueh-Ting Chu、Yu-Ching Chen、Jeffrey J.P. Tsai, Quantitative Analysis of ECI2 Expression from RNA, seq for Breast Cancer Gene Signatures - Proceedings of the 18th IEEE International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2018, Taichung, Taiwan
2018.10	Jia-Hua Cai、Yu-Ching Chen、Hsueh-Ting Chu、Jeffrey J. P. Tsai, Identification of Potential Long Non, coding RNA Biomarkers for Breast Cancer Patients with Somatic BRCA1 Mutations from RNA-Seq Datasets - Proceedings of the 18th IEEE International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2018, Taichung, Taiwan
2018.10	Jhih-Ying Chen、Chia-Min Chen、Pei-Chun Chang、Jeffrey J. P. Tsai, The Potential Dual, target Inhibitors for HER2/HSP90 Proteins from Traditional Chinese Medicine - Proceedings of the 18th IEEE International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2018, Taichung, Taiwan
2018.10	Charles C.N. Wang、Pei-Chun Chang、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Computational Modeling of the Early Development of Embryonic Leaves in Maize , Proceedings of the 18th IEEE International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2018, Taichung, Taiwan
2018.07	Zon-Yin Shae、Jeffrey J. P. Tsai, Transform Blockchain into Distributed Parallel Computing Architecture for Precision Medicine , Proceedings of the 38th IEEE International Conference on Distributed Computing Systems(ICDCS), Jul. 2018, Vienna
2018.06	Ing-Ray Chen、Jia Guo、Ding-Chao Wang、Jeffrey J. P. Tsai、Hamid Al-Hamadi、Ilsun You, Trust as a Service for IoT Service Management in Smart Cities , Proceedings of the Second IEEE International Conference on Smart City, Jun. 2018, UK
2018.02	Yan Zhuang、Andrea Atkins、Chi-Ren Shyu、Zon-Yin Shae、Jeffrey J. P. Tsai、Chung Hsu, A Hybrid Blockchain Design for Patient Recruitments and Persistent Monitoring for Clinical Trials , Proceedings of the IEEE Standards Association, Feb. 2018, Orlando Florida
2018.01	Charles C. N. Wang、I-Seng Chang、Phillip C.-Y. Sheu、Jeffrey J. P. Tsai, Application of Semantic Computing in Cancer on Secondary Data Analysis , Proceedings of the 2018 Second IEEE International Conference on Robotic Computing (IRC), Jan. 2018, Laguna Hills, CA
2018.01	Ezra B. Wijaya、Erwandy Lim、David Agustriawan、Chien-Hung Huang、Jeffrey J. P. Tsai、Ka-Lok Ng, Utilize Imputation Method and Meta, analysis to Identify DNA-Methylation-Mediated microRNAs in Ovarian Cancer - Proceedings of the Second IEEE International Conference on Robotic Computing, Jan. 2018, USA
2017.11	Jia Guo、Ing-Ray Chen、Ding-Chao Wang、Jeffrey J. P. Tsai、Hamid AI-Hamadi, A Case Study of IoT Participatory Sensing of Hazardous Ozone using Traces , Proceedings of the 7th International Conference on Electronics, Communications and Networks, Nov. 2017, Taiwan
2017.11	Jing-Doo Wang、Jeffrey J. P. Tsai、Charles C.N. Wang, Potential Applications using the Class Frequency Distribution of Maximal Repeats from Tagged Sequential Data , Proceedings of the 3rd International Conference on Fuzzy Systems and Data Mining, Nov. 2017, Taiwan
2017.10	Jing-Doo Wang、Yi-Chun Wang、Rouh-Mei Hu、Jeffrey J. P. Tsai, Extracting the Co, occurrences of DNA Maximal Repeats in both Human and Viruses - Proceedings of the 17th International Conference on BioInformatics and BioEngineering(BIBE), Oct. 2017, U.S
2017.06	Zon-Yin Shae、Jeffrey J. P. Tsai, On the Design of a Blockchain Platform for Clinical Trial and Precision Medicine , Proceedings of the 37th International Conference on Distributed Computing Systems(ICDCS), Jun. 2017, USA
2017.04	Y. Wang、I.R. Chen、J.H. Cho、Jeffrey J. P. Tsai, A Comparative Analysis of Trust, based Service Composition Algorithms in Service-Oriented Ad Hoc Networks - Proceedings of the International Conference on Information System & Data Mining, Apr. 2017, U.S.
2017.04	J. Guo、I.R. Chen、Praveen Kumar Korla、Jeffrey J. P. Tsai, A Mobile Cloud Hierarchical Trust Management Protocol for IoT Systems , Proceedings of the 5th IEEE International Conference on Mobile Cloud Computing, Apr. 2017, San Francisco
2016.10	Ka-Lok Ng、Jeffrey J. P. Tsai, Drug repurposing and therapeutic anti, microRNA predictions in oxidized low-density lipoprotein-induced the proliferation of vascular smooth muscle cell associated disease - Proceedings of the 27th International Conference on Genome Informatics, Oct. 2016, Shanghai, China,
2016.10	David Agustriawan、Ka-Lok Ng、Jeffrey J. P. Tsai, DNA Methylation, regulated microRNA Pathways in Ovarian Serous Cystadenocarcinoma: a Meta-analysis - Proceedings of the 27th International Conference on Genome Informatics, Oct. 2016, Shanghai, China
2016.10	Jing-Doo Wang、Wen-Ling Chen、Charles C N Wang、Jan-Gowth Chamg、Jeffrey J. P. Tsai, Mining Distinctive DNA Patterns from the Upstream of Human Coding&Non, Coding Genes via Class Frequency Distribution - Proceedings of the IEEE International Conference on Computational Intelligence in Bioinformatics and Computational Biology, Oct. 2016, Chiang Mai
2016.10	Jia Guo、Ing-Ray Chen、Jeffrey J. P. Tsai、Hamid Al-Hamadi, Trust, based IoT Participatory Sensing for Hazard Detection and Response - Proceedings of the IEEE 1st International Workshop for IoT Systems Provisioning and Management in Cloud Computing, Oct. 2016, Banff, Alberta
2016.10	Charles C.N. Wang、Pei-Chun Chang、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, A Comparison Study of Reverse Engineering Gene Regulatory Network Modeling , Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Charles C.N. Wang、Yu-Liang Lee、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Application of Latent Semantic analysis to clustering of Cardiovascular Gene Ontology , Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Chun-Ming Chang、Wei Shin Wong、Jeffrey J. P. Tsai, Stent Design for Compensating Wall Shear Stress via Computational Modeling and Fluid Dynamics , Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Wen-Ling Chan、Jing-Doo Wang、Jan-Gowth Chang、Jeffrey J. P. Tsa, Genome, wide Functional Identification of Maximal Consensus Patterns Derived from Multiple Species piRNAs - Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Bing-Rong Jiang、Wan-Ye Wu、Wen-Ling Chan、Jeffrey J. P. Tsai, piRNAtarget: the integrated database for mining functionality of piRNA and its targets , Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Tzu-Fan Chen、Rong-Ming Chen、Jeffrey J. P. Tsai、Rouh-Mei Hu, Fine Classification of Human Gut Microbiota by Using Hierarchical Clustering Approach , Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Han C.W. Hsiao、Sean H.F. Chen、Jeffrey J. P. Tsai, Deep Learning for Risk Analysis of Specific Cardiovascular Diseases Using Environmental Data and Outpatient Records , Proceedings of the IEEE 16th IEEE International Conference on Bioinformatics and Bioengineering, Oct. 2016, Taichung, Taiwan
2016.10	Chien-Hung Huang、Sheng-Jia Weng、Jywe-Fei Fang、Jeffrey J. P. Tsai、Nilubon Kurubanjerdjit、Ka-Lok Ng, Identification and Analysis of Palindromes for RNA Sequences , Proceedings of the 16th IEEE International Conference on Bioinformatics and Bioengineering(BIBE), Oct. 2016, Taiwan
2016.08	Jian Guo、Ing-Ray Chen、Jeffrey J. P. Tsai、Hamid Al-Hamadi, A Hierarchical Cloud Architecture for Integrated Mobility, Service, and Trust Management of SOA, based Internet of Things - Proceedings of the 6th IEEE International Conference on Innovative Computing Technology, Aug. 2016, Dublin, Ireland
2016.05	J. Wang、I.R. Chen、Jeffrey J. P. Tsai、D.C. Wang, Trust, based Cooperative Spectrum Sensing against SSDF attacks in Distributed Cognitive Radio Networks - Proceedings of the IEEE Communications Quality and Reliability International Workshop (CQR 2016), May. 2016, Stevenson, Washington
2016.05	Ji Wang、Ing-Ray Chen、Jeffrey J. P. Tsai、Ding-Chau Wan, Trust, based Cooperative Spectrum Sensing Against SSDF Attacks in Distributed Cognitive Radio Networks - Proceedings of the IEEE Communications Society Communications Quality and Reliability Workshop, May. 2016, Stevenson, WA
2016.05	Chun-Tzu Chen、Jeffrey J. P. Tsai、Tzu-Fan Chen、Hebron C. Chang、Rouh-Mei Hu, The 95% ethanolic extract from Typha angustifolia has an anti, smooth muscle cell proliferation and anti-inflammation effect - Proceedings of the 19th International congress of cytology, May. 2016, Yokohama
2016.04	Yi Chung、Yu-Ching Chen、Jeffrey J. P. Tsai, National Representatively Healthcare database and the Application , Proceedings of the 2nd IEEE International Conference on Multimedia Big Data, Apr. 2016, Taipei, Taiwan
2016.04	Kuo-Yi, Lin、Jeffrey J. P. Tsai, A Deep Learning, Based Customer Forecasting Tool - Proceedings of the Second IEEE International Conference on Multimedia Big Data, Apr. 2016, Taipei, Taiwan
2015.05	Jeffrey J. P. Tsai, An Integrated Systems Biology Approach for Biological Systems , Proceedings of the IEEE 12th International Symposium on Autonomous Decentralized Systems, May. 2015, United States
2014.01	Jia-Zhen Guo、Yo-Xiu Lin、Pei-Chun Chang、Chieh-Hsi Wu、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Compounds Screening from Traditional Chinese Herbs for Inhibition of In, stent Restenosis in Coronary Atherosclerosis - The 12th Asia Pacific Bioinformatics Conference, Jan. 2014, Shanghai, China,
2013.07	Kumar Jangam Vikram、Wen-Yih Chen、Jeffrey J. P. Tsai、Wen-Pin Hu, Molecular simulation methods for selecting thrombin, binding aptamers - The 10th FTRA International Conference on Secure and Trust Computing, data management, and Applications, Jul. 2013, Japan
2013.07	Nikubon Kuruanjerdjit、Jeffrey J. P. Tsai、Jin-Shuei Ciou、Ka-Lok Ng, A Study of Floral Transition in Arabidopsis Using Partial Correlation Analysis , The 2013 International Conference on Bioinformatics & Computational Biology, Jul. 2013, U.S.
2012.12	Pei-Lin Chen、Rong-Ming Chen、Chien-Yuan Li、Rouh-Mei Hu、Been-Chian Chien、Jeffrey J. P. Tsai, Towards Improving the Biological Relevance of Time, Series Gene Expression Clustering Using support Vector machine - Genome Informatics Workshop, Dec. 2012, Tainan, Taiwan
2011.12	Rouh-Mei Hu、Chen-Wei Hsiao、Rong-Ming Chen、Jeffrey J. P. Tsai, Blood Cell Image Classification Based on Hierarchical SVM , 2011 IEEE International Symposium on Multimedia, Dec. 2011, California, USA
2011.10	Ming-Jen Fan、Su-May Yu、Tzu-Chieh Hung、Wei-Quan Chen、Yue-Ie Hsing、Hsin-Li Lin、Chia-Cheng Liu、Jing-Gung Chung、Jeffrey J. P. Tsai, TTRSIS: A Cloud Computing Platform for Rice Functional Genomics Research through a Reverse Genetics Approach , Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2011.10	Jing-Gung Chung、Jeffrey J. P. Tsai、Chien-Yih Lin、Yang-Chia Shih、Jin-Shih Chen、Ming-Jen Fan, The Application of Molecular Markers to Identify Edible Fungi , A Case Sudy of Tremella fuciformis - Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2011.10	Yu-Liang Lee、Jie-Wei Weng、Wen-Chin Chiang、Yi-Wen Lin、Ka-Lok Ng、Jeffrey J. P. Tsai、Chi-Ying Huang, Investigating Cancer, related Proteins Specific Domain Interactions and Differential Protein Interactions Caused by Alternative Splicing - Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2011.10	David Hecht、Charles C.N. Wang、Rouh-Mei Hu、Jeffrey J. P. Tsai, Molecular Modeling Studies of AmpR Mediated AmpC beta, Lactamase Repression - Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2011.10	Charles C.N. Wang、Ka-Lok Ng、Yu-ching Chen、Phillip C.Y. Sheu、Jeffrey J. P. Tsai, Simulation of Bacterial Chemotaxis by the Random Run and Tumble Model , Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2011.10	Chun-Ming Chang、Jeffrey J. P. Tsai, Ergonomic Designs Based on Musculoskeletal Models , Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2011.10	Han C.W. Hsiao、Rouh-Mei Hu、W. L. Tai、R. M. Chen、Jeffrey J. P. Tsai, Object Relational Programming of Biomedical Images , Proceedings of the 11th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Oct. 2011, Taichung, Taiwan
2010.11	R. M. Chen、Y. J. Wu、S. R. Jhuang、M. H. Hsieh、C. L. Kuo、Y. L. Ma、R. M. Hu、Jeffrey J. P. Tsai, A Computer, aided System for Discriminating Normal from Cancerous Areas in IHC Liver Cancer Tissue Images Using K-means Clustering - The 2010 Conference on Technologies and Applications of Artificial Intelligence, Nov. 2010, Hsinchu, Taiwan
2009.06	D.A. Hecht、P. Sheu、Jeffrey J. P. Tsai, SCDL Applications to Drug Discovery , Proceedings of the 10th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Jun. 2009, Taichung, Taiwan
2009.06	C. Wang、D. Hacht、Chen-Wei Hsiao、P. Sheu、Jeffrey J. P. Tsai, Describing Dynamic Biological Systems using SPDL and SCDL , Proceedings of the 10th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Jun. 2009, Taichung, Taiwan
2009.06	A. C.H. Chen、Chen-Wei Hsiao、Jeffrey J. P. Tsai, Phylogenetic Analysis using Nuclear, encoded Mitochondrial Proteins - Proceedings of the 10th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Jun. 2009, Taichung, Taiwan
2009.06	J.W. Ou、R. M. Chen、Rouh-Mei Hu、C.Y. Tang、Jeffrey J. P. Tsai, An Integrative Tool for Gene Regulatory Network Reconstruction Based on Microarray Data , Proceedings of the 10th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Jun. 2009, Taichung, Taiwan
2009.06	R.M. Chen、M. T. Hou、Jeffrey J. P. Tsai, A Novel Approach for Motif Identification in Unaligned Molecular Sequences , Proceedings of the 10th IEEE Int'l Conf. on Bioinformatics and Bioengineering, Jun. 2009, Taichung, Taiwan
2009.05	S. J.S. Lee、H.W. Hsiao、Jeffrey J. P. Tsai, Residue Contact with Dynamic Time Warping and Least Squares Adjustment for Protein Structure Alignment , Proceedings of the ITAOI, May. 2009, Kinmen, Taiwan
2008.11	Chen-Wei Hsiao、S. J.X. Lee、Jeffrey J. P. Tsai, Local Alignment of Protein Structures Using Non, rigid Approach - Proceedings of the 8th Int’l Conf. on Intelligent Systems Design and Applications, Nov. 2008, Taiwan
2008.09	S. Yang、J. Zhang、A. Huang、Jeffrey J. P. Tsai、P. S. Yu, A Context, driven Content Adaptation Planner for Improving Mobile Internet Accessibility - Proceedings of the 2008 IEEE Int’l Conf. on Web Services, Sep. 2008, Beijing, China
2008.08	V. Devarashetty、Jeffrey J. P. Tsai、L. Ma、D. Zhang, Modeling of Secure Sensor Networks Using an Extended Elementary Object System , Proceedings of the 7th IEEE Int’l Conf. on Cognitive Informatics, Aug. 2008, Stanford University, CA
2008.06	J.W. Ou、R. M. Chen、Rouh-Mei Hu、Jeffrey J. P. Tsai, A Systematic Genes Expression Explorer Tool for Multiple and Paired Chips , Proceedings of 11th SDPS Transdisciplinary Conference on Integrated Design and Process Science, Jun. 2008, Taichung, Taiwan
2008.06	C.H. Wu、R.M. Chen、Jeffrey J. P. Tsai, Sharing Cancer, Related Genes Research on Peer-to-Peer Network - Proceedings of 11th SDPS Transdisciplinary Conference on Integrated Design and Process Science, Jun. 2008, Taichung, Taiwan
2008.06	C.Y. Hsu、Rouh-Mei Hu、R. M. Chen、Jeffrey J. P. Tsai, IHCread: An Automatic Immuohistochemistry Image Analysis Tool , Proceedings of 11th SDPS Transdisciplinary Conference on Integrated Design and Process Science, Jun. 2008, Taichung, Taiwan
2008.06	Rouh-Mei Hu、Ka-Lok Ng、Chen-Wei Hsiao、Jeffrey J. P. Tsai、Phillip C.Y. Sheu, BIOSEMANTIC SYSTEM , 2008 IEEE International Conference on Sensor Networks, Ubiquitous, and Trustworthy Computing, Jun. 2008, Asia University, Taiwan
2008.06	D. Hecht、Jeffrey J. P. Tsai、P. Sheu, Biosemantic System: Applications of Structured Natural Language to Biological and Biochemical Research , Proceedings of the 1st IEEE Ambient Semantic Computing Workshop (ASC2008), Jun. 2008, Taiwan
2008.06	Z. Yu、Jeffrey J. P. Tsai, A Framework of Machine Learning Based Intrusion Detection for Wireless Sensor Networks , Proceedings of the 2nd IEEE International Conference on Sensor Network, Ubiquitous, and Trustworthy Computing (SUTC2008), Jun. 2008, Taichung, Taiwan
2008.05	Y. Luo、Jeffrey J. P. Tsai, A Framework for Extrusion Detection Using Machine Learning , Proceedings of the 11th IEEE Symposium on Object/Component/Service-oriented Real-time Distributed Computing (ISORC08), May. 2008, Taichung, Taiwan
2006.12	M. Hirakawa、M. Muhlhauser、S. Rahardja、P. C.-Y. Sheu、L. Smarr、Jeffrey J. P. Tsai, Proceedings of the 8th IEEE International Symposium on Multimedia , Issues, Challenges, and Future Directions in Multimedia Research, Dec. 2006, San Diego, CA
2006.12	Chen-Wei Hsiao、H.K. Chung、C.K. Hsu、Jeffrey J. P. Tsai, Potential Function Optimization using Particle Swarm Approach to One, class Classification - Proceedings of the 14th National Conference on Fuzzy Theory and Its Applications, Dec. 2006, Kaohsiung, Taiwan
2006.09	Z. Yu、Jeffrey J. P. Tsai, Fuzzy Model Tuning for Intrusion Detection Systems , Proceedings of the 3rd IFIP International Autonomic and Trusted Computing Conference, Sep. 2006, Springer-Verlag, New York
2006.09	P. Pierre-Etienne、S. P. Ren、J. Nogiec、Jeffrey J. P. Tsai, Separating Functional and Non, functional Concerns through Coordination: an Application to Reliability - Proceedings of the 30th IEEE Int'l Computer Software and Applications Conference, Sep. 2006, Chicago
2006.06	L. Shen、Jeffrey J. P. Tsai, Reconfigurable Coordination Model for Dynamic Autonomous Real, Time Systems - Proceedings of the 1st IEEE International Conference on Sensor Network, Ubiquitous, and Trustworthy Computing, Jun. 2006, Taichung, Taiwan
2006.06	H.T. Chu、C.C. Huang、Z.H. Lian、Jeffrey J. P. Tsai, A Ubiquitous Warning System for Asthma, Inducement - Proceedings of the IEEE Workshop on Multimedia Technology and Ubiquitous Computing, Jun. 2006, Taichung, Taiwan
2006.05	P. Srinivasan、Jeffrey J. P. Tsai、L. Ma, Modeling an E, Auctioning System using Formal Method with a Trusted Agent Proxy - Proceedings of Workshop on Advances in Computer Science and Engineering, May. 2006, UC Berkeley
2006.02	Y.J. Chen、H.T. Chu、Jeffrey J. P. Tsai, An Analysis of H5N1 Influenza A Virus Hemagglutinin , Proceedings of the 4th Asia Pacific Bioinformatics Conference, (APBC06), Feb. 2006, Taiwan
2006.02	J.R. Lee、H.C. Liu、Jeffrey J. P. Tsai、Ka-Lok Ng, Large Scale Predication of Domain, Domain Interactions from Protein-Protein Interactions - Proceedings of the 4th Asia Pacific Bioinformatics Conference (APBC06), Feb. 2006, Taiwan
2006.02	C.H. Huang、Jeffrey J. P. Tsai、F. F. Fang、Ka-Lok Ng, Topological Stability of the Protein, Protein Interaction Networks - Proceedings of the 4th Asia Pacific Bioinformatics Conference (APBC06), Feb. 2006, Taiwan
2005.12	Y. Luo、Jeffrey J. P. Tsai, A Graphical Simulation Environment for Modeling and Analysis of Sensor Networks , Proceedings of the 6th IEEE Int’l Symp. on Multimedia, Dec. 2005, CA
2005.12	Y.J. Chen、H.T. Chu、Jeffrey J. P. Tsai, Structure, Based Virtual Screening of HDAC Proteins with Functional Evolutionary Analysis - Proceedings of the National Computer Symp., Dec. 2005, Taiwan
2005.11	C.H. Huang、P.H. Lee、Jeffrey J. P. Tsai、Ka-Lok Ng, Modular Structure of Protein, Protein Interaction - Proceedings of the NCTS Symp. on Network Biology, Nov. 2005, Tsing Hua Univ., Taiwan
2005.09	Y.-J. Chen、F. P. Chu、H. T. Chu、Jeffrey J. P. Tsai, Evolutionary Analysis of MTA, Related Proteins - Proceedings of the Bioinformatics in Taiwan (BIT), Sep. 2005, Taiwan
2005.08	P.H. Lee、C.H. Huang、J.F. Fang、Jeffrey J. P. Tsai、Ka-Lok Ng, Study of the Protein, Protein Interaction Networks via Random Graph Approach - Proceedings of the 4th IEEE Int’l Conf. on Cognitive Informatics, Aug. 2005, CA
2005.05	I.C. Wang、R.M. Chen、R.M. Fu、M.I. Lee、C.W. Leung、K.C. Shih、Jeffrey J. P. Tsai、K.C. Shih, Recognizing Cancer, Related Genes based on Single Nucleotide Polymorphism - Proceedings of the 8th ETCM Conference, May. 2005, Taiwan
2005.05	C.W. Leung、R.M. Chen、R.M. Fu、K.C. Shih、I.C. Wang、M.I. Lee、Jeffrey J. P. Tsai、C. K. Chang, Reliability Verification of Microarray Gene Expression Database , Proceedings of the 8th ETCM Conference, May. 2005, Taiwan
2004.12	K. C. Shih、R.M. Chen、Jeffrey J. P. Tsai, Predication of Gene Regulatory Networks using Differential Expression of cDNA Microarray Data , Proceedings of the 6th IEEE Int'l Symp. on Multimedia Software Engineering, Dec. 2004, Florida, USA
2004.12	H.W. Hsiao、M. S. Tsai、Jeffrey J. P. Tsai, Distributed Discovery of Asychronous Partial Periodic Patterns in Sequence Data Using Modified Periodicity Transform , Proceedings of the 6th IEEE Int'l Symp. on Multimedia Software Engineering, Dec. 2004, Florida, USA
2004.09	Z. Yu、Jeffrey J. P. Tsai, A Multiple, Class System for KDD Intrusion Detection - Proceedings of the 28th IEEE Int'l Computer Software and Applications Conference, Sep. 2004, Hong Kong
2004.09	L. Ma、Jeffrey J. P. Tsai、T. Murata, A Secure Mobile Agent System Model Based on Extended Elementary Object Net , Proceedings of the 28th IEEE Int'l Computer Software and Applications Conference, Sep. 2004, Hong Kong
2004.05	F. M. Liu、Jeffrey J. P. Tsai、R.M. Chen、S.H. Chen、S.H. Shih, FMGA: Finding Motifs by Genetic Algorithm , Proceedings of the 5th IEEE Int'l Symp. on Bioinformatics and Bioengineering, May. 2004, Taiwan
2004.05	S. N. Chen、Jeffrey J. P. Tsai、R.M. Chen、C. W. Huang、R. Lin, Using Distributed Computing Platform to Solve High Computing and Huge Data Processing Problems in Bioinformatics , Proceedings of the 5th IEEE Int'l Symp. on Bioinformatics and Bioengineering, May. 2004, Taiwan
2004.05	S. N. Chen、Jeffrey J. P. Tsai、C.K. Lin、C. W. Huang, Regulatory Protein Binding Site Analysis Using Position Weight Matrix , Proceedings of the 21st Workshop on Combinatorial Mathematics and Computational Theory, May. 2004, Taichung, Taiwan
2004.05	S.S. Shen、K.C. Shih、C.W. Liang、F.M. Liu、R.M Chen、J.G. Chang、Jeffrey J. P. Tsai、S.H. Shih, Analysis of Cancerous Genes based on Microarray Gene Expression Data , Proceedings of the 21st Workshop on Combinatorial Mathematics and Computational Theory, May. 2004, Hong Kong
2003.12	H. W. Hsiao、P. Wu、Rouh-Mei Hu、Jeffrey J. P. Tsai, In Silico Discovery of Cancer, Related Genes by Functional Domain Analysis - Proceedings of the 5th IEEE Int'l Symp. on Multimedia Software Engineering, Dec. 2003, Taiwan
2003.12	S.N. Chen、Jeffrey J. P. Tsai、W.H. Chen, An Intelligent Agent, Based Biomedical Literature Mining System for Cancer-Related Genes - Proceedings of the 5th IEEE Int'l Symp. on Multimedia Software Engineering, Dec. 2003, Taiwan
2003.12	Chen-Wei Hsiao、S. H. Chen、Jeffrey J. P. Tsai, Subcellular Localization Prediction of Eukaryotic Protein Using Functional Domain Frequency Measure , Proceedings of the 5th IEEE Int'l Symp. on Multimedia Software Engineering, Dec. 2003, Taiwan
2003.12	W.F. Huang、R.M. Chen、Rouh-Mei Hu、R.M. Chen, Searching the Regulatory Protein Binding Site by Steepest Ascent Algorithm , Proceedings of the 5th IEEE Int'l Symp. on Multimedia Software Engineering, Dec. 2003, Taiwan
2003.12	L. Ma、Jeffrey J. P. Tsai、T. Murata, Extended Elementary Object System Model for Mobile Agent Security , Proceedings of the 2003 World Congress on Integrated Design and Process Technology, Dec. 2003, Texas, USA
2003.03	Jeffrey J. P. Tsai、J.G. Chang、R.M. Chen、Chen-Wei Hsiao、Rouh-Mei Hu、S.N. Chen、M.M. Lee、W.L. Chan、P.X. Wu、W.H. Chen, A Bioinformatics Approach for Mining Cancer, related Genes over Internet - Proceedings of the IEEE ICDE Workshop on Bioinformatics, Mar. 2003, India
2003.03	Jeffrey J. P. Tsai、J.G. Chang、R.M. Chen、Chen-Wei Hsiao、Rouh-Mei Hu、S.N. Chen、M.M. Lee、W.L. Chan、P.X. Wu、W.H. Chen, A Framework for Cancer, related Genes Mining over the Internet - Proceedings of the 3rd IEEE Symp. on Bioinformatics and Bioengineering, Mar. 2003, Washington D.C.
2002.11	D. Zhang、Jeffrey J. P. Tsai, Machine Learning and Software Engineering , Proceedings of the IEEE Int’l Conf. on Tools with Artificial Intelligent, Nov. 2002, Washington D.C.
2002.08	Jeffrey J. P. Tsai、E. Juan, Modeling and Heuristic Technique for Efficient Verification of Component, Based Software Systems - Proceedings of the 1st IEEE Int’l Conf. on Cognitive Informatics, Aug. 2002, Calgary, Alberta, Canada
2002.06	C. Xiong、T. Murata、Jeffrey J. P. Tsai, Modeling and Simulation of Routing Protocol for Mobile Ad Hoc Networks Using Colored Petri Nets , Proceedings of the Workshop on Formal Methods Applied to Defense Systems, Jun. 2002, Adelaide, Australia
2002.06	L. Ma、Jeffrey J. P. Tsai、T. Murata, A Secure Mobile Agent System Model Based on Extended Elementary Object Net , Proceedings of the World Congress on Integrated Design and Process Technology, Jun. 2002, California, USA
2002.05	L. Ma、Jeffrey J. P. Tsai、T. Murata, Modeling a Secure Mobile Agent System with Petri Nets Scheme , Proceedings of the 12th Information Security Conference, May. 2002, Taiwan
2001.03	Y. Deng、J. Wang、Jeffrey J. P. Tsai、K. Beznosov, Formal Analysis of Software Security Systems Architecture , Proceedings of the 5th IEEE Symposium on Autonomous Decentralized Systems, Mar. 2001, Dallas, TX
2000.06	J.-M. Lin、Jeffrey J. P. Tsai, An Agent, based Internet Software Integration System - Proceedings of the 4th World Conference on Integrated Design and Process Technology, Jun. 2000, Dallas, TX
2000.06	Jeffrey J. P. Tsai、E. Juan, A Compositional Approach for Modeling and Verification of Component, Based Software Systems - Proceedings of the NSF/ARL Workshop on Software Evolution, Jun. 2000, Italy
1999.06	Jeffrey J. P. Tsai、K. Xu, Architecture Specification of Multimedia Software Systems , Proceedings of the 6th IEEE International Conference on Multimedia Computing and Systems, Jun. 1999, Florence, Italy
1998.04	Jeffrey J. P. Tsai、F. Bastani、M. Hirakawa、S. Barchayara, Multimedia Software Engineering , Proceedings of Int'l Conf. on Software Engineering, Apr. 1998, Kyoto, Japan
1997.10	Jeffrey J. P. Tsai、A. Sistla、A. Sahay, An Incremental Verification of Software Architecture , ACM SIGSOFT Notics, Oct. 1997
1997.08	Jeffrey J. P. Tsai、E. Juan, Efficient Compositional State, Space Verification for Communicating Processes in Distributed Systems - Proceedings of IEEE Int'l Symposium on High-Assurance Systems Engineering, Aug. 1997, Washington D.C.
1997.02	Jeffrey J. P. Tsai、A. Sistla、A. Sahay、R. Paul, An Incremental Verification Approach for Software Architecture Specification of Real, Time Systems - Proceeding of the 3rd IEEE Object Oriented Real-Time Dependable System Workshop, Feb. 1997, Laguna Beach, CA
1996.12	S. Yang、Jeffrey J. P. Tsai、A. Liu, An Integrated Architecture for Distributed Real, Time Systems Analysis - Proceedings of the 2nd World Conference on Integrated Design and Process Technology, Dec. 1996, Austin, TX
1996.10	Jeffrey J. P. Tsai、B. Li, A Hybrid Execution Model for Logic, Based Requirements Specifications - Proceedings of IEEE International High-Assurance Systems Engineering, Oct. 1996, Ontario, Canada
1996.10	E. Juan、Jeffrey J. P. Tsai、T. Murata, An Efficient Analysis Method for Large, Scale Concurrent Systems - Proceedings of Int'l IEEE High-Assurance Systems Engineering, Oct. 1996, Ontario, Canada
1996.08	Jeffrey J. P. Tsai、S. Yang、P. Chang、E. Juan, Verifying Timing Properties of Distributed Real, Time Systems Using Timing Constraints Petri Nets - Proceedings of the 20th IEEE International Computer Software and Applications Conference, Aug. 1996, Seoul, Korea
1996.06	Jeffrey J. P. Tsai, Automatic Generation of Verification Scenario from Systems Requirements Specification , Proceedings of the 8th Int'l Conference on Software Engineering and Knowledge Engineering, Jun. 1996, Nevada
1996.02	Jeffrey J. P. Tsai、T. Weigert, A Logic, Based Requirements Language for the Specification and Analysis of Real-Time Systems - Proceedings of the 2nd IEEE Object-Oriented Real-Time Dependable System Workshop, Feb. 1996, Laguna Beach, CA
1995.11	A. Liu、Jeffrey J. P. Tsai, A Knowledge, Based Approach for Requirements Analysis - Proceedings of the 1995 IEEE Tools with Artificial Intelligence Conference, Nov. 1995, Herndon, Virginia
1995.09	Jeffrey J. P. Tsai, A Knowledge, Based Approach to Specification-Based Software Architecture - Proceedings of the 1995 NSF/DARPA/ONR Software Specification Workshop, Sep. 1995, Monterey, CA
1995.08	X. Zeng、Jeffrey J. P. Tsai、T. Weigert, Improving Software Quality Through a New Testing Strategy , Proceedings of the 19th IEEE International Computer Software and Applications Conference, Aug. 1995, Texas, USA
1995.06	Jeffrey J. P. Tsai, Requirements, Specification, and Analysis of Autonomous Distributed Communication Service , Proceedings of the National Development Symposium, Jun. 1995, Taipei, Taiwan
1994.11	Jeffrey J. P. Tsai、B. Li、A. Liu, Modeling and Parallel Evaluation of Non, Functional Requirements Using FRORL Requirements Language - Proceedings of the 18th IEEE International Computer Software and Applications Conference, Nov. 1994, Taipei, Taiwan
1994.10	Jeffrey J. P. Tsai、B. Li, Improving Parallel Execution Performance for Logic Programs Using Mode Information , Proceedings of the 6th IEEE Symposium on Parallel and Distributed Processing, Oct. 1994, Dallas, TX
1994.10	Jeffrey J. P. Tsai、B. Li, A Simple Graph Algorithm for Message, optimized Distributed Computing - Proceedings of the 7th International Conference on Parallel and Distributed Computing, Oct. 1994, Las Vegas, Nevada
1993.06	Jeffrey J. P. Tsai、S. Yang、P. Chang, Schedulability Analysis of Real, Time Software Using Timing Constraints Petri Nets - Proceedings of the European Computer Science Conference, Jun. 1993, Paris, France
1993.06	Jeffrey J. P. Tsai、A. Liu、K. Nair, Debugging of Logic, Based Requirements Languages - A FRORL Approach - Proceedings of the IEEE Int'l Conf. on Software Engineering and Knowledge Engineering, Jun. 1993, San Francisco, CA
1993.04	Jeffrey J. P. Tsai、S. Yang、P. Chang, Timing Constraints Petri Nets and Their Application to Schedulability Analysis of Real, Time Software - Proceedings of the IEEE Workshop on Parallel and Distributed Real-Time Systems, Apr. 1993, New Port Beach, CA
1993.04	Jeffrey J. P. Tsai, A Requirement Specification Language for Autonomous Decentralized Systems Development , Proceedings of IEEE International Symposium on Autonomous Decentralized Systems, Apr. 1993, Hitachi System Plaza, Kawasaki, Japan
1992.10	Jeffrey J. P. Tsai、H. Jang, A Framework for Knowledge, Based Systems Verification - Proceedings of the 1992 IEEE System, Man, Cybernetics Conference, Oct. 1992, Chicago, IL
1992.09	Jeffrey J. P. Tsai、R. Sheu、B. Li, A Framework of Logic, Based Transformation System - Proceedings of the 1992 IEEE Computer Software and Applications Conference, Sep. 1992, Chicago, IL
1992.09	Jeffrey J. P. Tsai、S. Yang、Y. Bi, Visualization and Debugging Distributed Real, Time Software Systems - Proceedings of the 1992 IEEE Int'l Conf. on Automation, Robotics, and Computer Vision, Sep. 1992, Singapore
1991.12	Jas Sushil、Jeffrey J. P. Tsai, EMBY: Expert System for Low Level Segmentation in Microscopic Image of Human Enbryo , Proceedings of The World Congress on Expert Systems, Dec. 1991, Orlando, FL
1991.12	J. Sushil、Jeffrey J. P. Tsai, ESCHE: Expert System for Feature Identification in Human Chest of Computer Tomography , Proceedings of The World Congress on Expert Systems, Dec. 1991, Orlando, FL
1991.11	Jeffrey J. P. Tsai、T. Weigert、H. Jang, Non, Monotonic Logic as a Basis for Requirements Specification and Analysis - Proceedings of the IJCAI 1991 International Symposium on Artificial Intelligence, Nov. 1991, Cancun, Mexico
1991.11	D. Cooke、M. Feather、S. Fickas、N. Minsky、P. Selfridge、D. Smith、Jeffrey J. P. Tsai, Is A.I. the Solution for Software Engineering , Proceedings of the3rd IEEE Tools with Artificial Intelligence Conference, Nov. 1991, California, USA
1991.11	Jeffrey J. P. Tsai、H. Chen、Y. Bi, An Event, Based Real-Time Logic to Specify Behavior and Timing Properties of Real-Time Systems - Proceedings of the 1991 IEEE Conf. on Tools for Artificial Intelligence, Nov. 1991, San Jose, CA
1991.09	Jeffrey J. P. Tsai、H. Jang、K. S., RT, FRORL: A Formal Requirements Specification Language for Specifying and Analyzing Real-Time Systems - Proceedings of the 1991 IEEE International Computer Software and Applications Conference, Sep. 1991, Tokyo, Japan
1991.09	Jeffrey J. P. Tsai, Artificial Intelligence Techniques for Software Engineering , Proceedings of the Fujitsu International Software Symposium, Sep. 1991, Kawasaki, Japan
1991.08	Jeffrey J. P. Tsai、R. Sheu, A Distributed Cooperative Agents Architecture for Software Development , Proceedings of the IJCAI International Workshop on Intelligent Cooperative Information Systems, Aug. 1991, Sydney, Australia
1991.05	J. Chen、L. Chen、Jeffrey J. P. Tsai、C. Carlson, A Research Overview of Distributed Database System Design , Proceedings of the 22nd Annual Pittsburgh Conf. on Modeling and Simulation, May. 1991, Pittsburgh, Pennsylvania
1991.05	Jeffrey J. P. Tsai、Y. Bi, Timing Errors of Real, Time Software Systems and Their Detection - Proceedings of the 1991 IEEE International Symposium on Software Reliability Engineering, May. 1991, Austin, TX
1991.05	J. Chen、L. Chen、Jeffrey J. P. Tsai, Nested Concurrency and Its Application to Distributed Database Systems Design , Proceedings of the 22nd Annual Pittsburgh Conf. on Modeling and Simulation, May. 1991, Pittsburgh, Pennsylvania
1991.03	Jeffrey J. P. Tsai, Integrating Data Collection, Debugging, and Visualization , Proceedings of the 7th International Conference on Advanced Science and Technology, Mar. 1991, Argonne National Laboratory, ILL.
1990.11	Jeffrey J. P. Tsai、Thomas Weigert、H. C. Jang, A Hybrid Knowledge Representation for Requirement Specification and Reasoning , Proceedings of the 1990 IEEE Conf. on Tools for Artificial Intelligence, Nov. 1990, Chicago, Illinois
1990.11	B. Binder、Jeffrey J. P. Tsai, KBRMS: An Intelligent Assistant for Requirement Definition , Proceedings of the 1990 IEEE Conf. on Tools for Artificial Intelligence, Nov. 1990, Chicago, Illinois
1990.07	M. Rao、Y. Ying、Jeffrey J. P. Tsai, Classification of Intelligent Simulation , Proceedings of the 1990 Summer Simulation Conf., Jul. 1990, Calgary, Alberta, Canada
1990.05	Jeffrey J. P. Tsai、K.Y. Fang、Y.D. Bi, On Real, Time Software Testing and Debugging - Proceedings of the 1990 IEEE Computer Software and Applications Conf., May. 1990, Chicago, Illinois

Project Title	Participator	Period
強腎鏈始創計畫：以多中心隨機臨床試驗驗證結合醫療大數據、人工智能、與區塊鏈技術所架構之臨床腎病照護平台--強腎鏈始創計畫：以多中心隨機臨床試驗驗證結合醫療大數據、人工智能、與區塊鏈技術所架構之臨床腎病照護平台(3/4) (MOST 111-2321-B-468-001 -)	蔡進發(JEFFREY J. P. TSAI)、Zon-Yin Shae、Chin-Chi Kuo、Rouh-Mei Hu、Yuan-Yu Tsai、Zhi-Ren Tsai、Charles C.N. Wang、Wen-Ling Chan、Hsiu-Yin Chiang	2022.07 ~ 2023.06
強腎鏈始創計畫：以多中心隨機臨床試驗驗證結合醫療大數據、人工智能、與區塊鏈技術所架構之臨床腎病照護平台--強腎鏈始創計畫：以多中心隨機臨床試驗驗證結合醫療大數據、人工智能、與區塊鏈技術所架構之臨床腎病照護平台(2/4) (MOST 110-2321-B-468 -001)	Jeffrey J. P. Tsai、Zon-Yin Shae、Chin-Chi Kuo、Rouh-Mei Hu、Yuan-Yu Tsai、Zhi-Ren Tsai、Charles C.N. Wang、Wen-Ling Chan、Hsiu-Yin Chiang	2021.07 ~ 2022.06
強腎鏈始創計畫：以多中心隨機臨床試驗驗證結合醫療大數據、人工智能、與區塊鏈技術所架構之臨床腎病照護平台－強腎鏈始創計畫：以多中心隨機臨床試驗驗證結合醫療大數據、人工智能、與區塊鏈技術所架構之臨床腎病照護平台 (MOST 109-2321-B-468-001-)	Jeffrey J. P. Tsai、Zon-Yin Shae、Chin-Chi Kuo、Rouh-Mei Hu、Yuan-Yu Tsai、Zhi-Ren Tsai、Charles C.N. Wang、Wen-Ling Chan、Hsiu-Yin Chiang	2020.07 ~ 2021.06
應用人工智慧發展改善大學生科技成癮之個人化早期偵測與自我導向學習系統--總計畫及子計畫一：應用人工智慧技術萃取科技成癮資訊之APP系統 (MOST 108-2511-H-468 -001 -MY3)	Jeffrey J. P. Tsai、Zon-Yin Shae、Zhi-Ren Tsai、Chun-Ming Chang、Shian-Shyong Tseng	2019.08 ~ 2022.07
以生醫大數據分析為基礎的精準癌症醫療研究 (MOST 107-2632-E-468-002)	Jeffrey J. P. Tsai	2018.08 ~ 2019.07
全視角智慧校務大數據應用研究計畫 (MOST 107-2634-F-468-001)	Jeffrey J. P. Tsai	2018.07 ~ 2019.06
整合型計算醫學應用於動脈粥狀硬化疾病 (NSC 102-2632-E-468-001-MY3)	Jeffrey J. P. Tsai、Yu-Ching Chen、Wen-Pin Hu、Chen-Wei Hsiao、Pei-Chun Chang、Ka-Lok Ng、Rouh-Mei Hu、Phillip C.Y. Sheu、Chun-Ming Chang	2013.08 ~ 2016.07
100年度亞大心‧中文情－生命閱讀與書寫課程革新計畫（10049021） (20120914161140)	Jeffrey J. P. Tsai、Lin, Y. S	2011.12 ~ 2013.01
利用環控管理技術提升重要藥用菇類之生產及利用－重要藥用菇類環控栽 (NSC 99-2632-B-468 -001 -MY3)	Chien-Yih Lin、Jeffrey J. P. Tsai、Pei-Jane Huang、Yang-Chia Shih	2010.08 ~ 2013.07
阿拉伯芥整合系統生物學研究 (NSC 99-2632-E-468-001-MY3)	Jeffrey J. P. Tsai、Ka-Lok Ng、Phillip C.Y. Sheu、Chen-Wei Hsiao、Chien-Yih Lin、Rouh-Mei Hu	2010.08 ~ 2013.07
生醫分析系統之語意整合 (96-2221-E-468-011-MY3)	Jeffrey J. P. Tsai、Phillip C.Y. Sheu、蔡崇豪	2007.08 ~ 2010.07
災後生活重建計劃—霧峰地區學校教學及學生輔導計畫		2003.09 ~ 2004.06
台電保全事業營運規劃之研究 (TPC-546-92-4832-13 )		2003.06 ~ 2004.05
霧峰實驗--九二一重建生活教育學習空間(I)	Jeffrey J. P. Tsai	2002.08 ~ 2002.12

Award Name	Awarding Unit
Honorary Member	The Phi Tau Phi Scholastic Honor Society of the ROC
The ATLAS Transdisciplinary Distinguished Achievement Award	The Academy of Transdisciplinary Learning & Advanced Studies
Top 10 Outstanding Presidents Award, Association of Private Universities and Colleges	Association of Private Universities and Colleges
Keynote Speaker : "AI in Precision Medicine"	Taiwan Healthcare Expo
Keynote Speaker:“Taiwan Higher Education in the Context of Globalization”	The 13th QS Asia Pacific Professional Leaders in Education Conference and Exhibition
The IETI Annual Scientific Award	International Engineering and Technology Institute
Distinguished Fellow	International Engineering and Technology Institute
Distinguished Leadership Award	National Chiao Tung University
Keynote Speaker: “Taiwan Higher Education in the Context of Globalization”	Asia University Higher Education Forum
Keynote Speaker:“Taiwan Higher Education in the Context of Globalization”	Internationalization Higher Education Seminar
Best Paper Award	The IEEE Communications Society of Communications Quality and Reliability Workshop
Keynote Speaker: “Experiences in Developing a New University”	2015 MUST President Forum, University of Macau
Outstanding Alumnus Award	National Chiao Tung University
Distinguished Speaker: “Great Success of Asia University”	The ATLAS Biennial Conference on Transdisciplinary- Transnational -Transcultural
George Kozmetsky Innovation & Entrepreneurship Award	The ATLAS
2012 Founding Fellow	The International Institute of Cognitive Informatics and Cognitive Computing (ICIC)
2010 Founding Fellow	International Transdisciplinary Scientists’ Village
Ramamoorthy & Yeh Transdisciplinary Distinguished Achievement Award	The ATLAS
Keynote Speaker: “A New Frontier: Cyber Physical Systems”	The 2009 Joint Conference on Pervasive Computing
Keynote Speaker: “A New Frontier: Software Engineering for Cyber Physical Systems”	The 11th SDPS Transdisciplinary Conference on Integrated Design and Process Science
Keynote Speaker: "Opportunities and Challenges of Sensor Networks Computing"	National Computer Symposium
Distinguished Speaker: “Challenges and Opportunities of Ubiquitous Computing Paradigm”	Future Computing – Transparent Computing and Active Services
Distinguished Speaker: "Transdisciplinary Research and Education in Health Science, Management, and Information Technology"	The 9th Conference on Integrated Design and Process Technology
Keynote Speaker: "Intrusion Detection for Sensor Networks"	The 19th IEEE Advanced Information Networking and Application Conference
Keynote Speaker: “Attacks and Countermeasures in Software System Security”	IEEE International Symposium on E-Commerce for Dynamic E-Business
Keynote Speaker: “Applications of A.I. Research in Bioinformatics”	World Congress on Integrated Design and Process Science
Keynote Speaker: "Transdisciplinary Research and Education in Healthcare, Management, and Information Technology"	Conf. on Sun Yat-sen Philosophy and Modern Society: Managerial Science’s Practice and Application
Keynote Speaker: "New Areas of Applied Artificial Intelligent Research"	The 14th IEEE International Conf. on Tools with Artificial Intelligence
Distinguished Speaker: "Transdisciplinary Research and Education in Healthcare, Management, and Information Technology"	National Chung Cheng University
Keynote Speaker: "Model and Heuristic Technique for Efficient Verification of Component-Based Software Systems"	The 1st IEEE International Conference on Cognitive Informatics
Keynote Speaker: "Compositional Modeling and Verification of Software systems"	Object-Oriented Software Technology and Applications Workshop
Distinguished Speaker in Software Engineering: "Compositional Approach for Modeling and Verification of Software Systems"	Southern Methodist University
2001 Faculty Research Award	College of Engineering, University of Illinois at Chicago
Keynote Speaker: "Engineering of Agent-Based Systems"	International Computer Symposium
Distinguished Speaker: "Knowledge-Based Software Systems"	University of Wollongong
Keynote Speaker: "Engineering of Intelligent Agent Systems"	The 11th IEEE International Conference on Tools with Artificial Intelligence
Distinguished Speaker: "Specification and Verification of Agent-Based Systems"	University of Texas at Dallas
Tamkang Chair Distinguished Speaker: "Engineering of Intelligent Systems"	Tamkang University
1998 IEEE TAI Research Achievement Award	IEEE Computer Society
1998 Fellow	Society for Design and Process Science
1997 Fellow	American Association for the Advancement of Science
1996 Fellow	The Institute of Electrical and Electronics Engineers
Distinguished Speaker: "Knowledge-Based Software Engineering for Communication Software"	Advanced Communication Research Laboratory
University Scholar Faculty Excellence Award	University of Illinois Foundation
1993-1996 IEEE Distinguished Speaker	IEEE Computer Society
NSF Research Initiation Award	U.S. National Science Foundation
Engineering Foundation Research Award	U.S. Engineering Foundation Society
IEEE Meritorious Service Award	IEEE Computer Society
University Scholar Award	University of Illinois Foundation
SDPS Service Award	Society for Design and Process Science
IEEE Technical Achievement Award	IEEE Computer Society
Faculty Research Award	University of Illinois at Chicago
Founding Fellow	International Transdisciplinary Scientists’ Village

Category	Course Code	Course Title	Year
Doctoral Program	EB100611A	博士論文	111